Petar Stojanov

I am a postdoctoral researcher at the Broad Institute of MIT and Harvard, where I am supervised by Prof. Gad Getz. I previously received my PhD in Computer Science at Carnegie Mellon University, where I was fortunate to be advised by Jaime Carbonell and Kun Zhang. Prior to that, I was an associate computational biologist at the Getz Lab.

My research interests span machine learning and computational biology. I am currently very interested in how causal discovery methodology can be applied and further improved for the purpose of analyzing genomic data such as cancer mutation and single-cell RNA sequencing data, in order to understand causal relationships which are are relevant to cancer progression. My doctoral research was in transfer learning and domain adaptation from the causal perspective, and I am still interested and active in this field.

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Machine Learning
Domain Adaptation with Invariant Representation Learning: What Transformations to Learn?
Petar Stojanov, Zijian Li, Mingming Gong Ruihu Cai Jaime Carbonell, Kun Zhang
NeurIPS, 2021

Domain Adaptation as a Problem of Inference on Graphical Models
Kun Zhang, Mingming Gong, Petar Stojanov, Biwei Huang, Qingsong Liu, Clark Glymour
NeurIPS, 2020

Low-Dimensional Density Ratio Estimation for Covariate Shift Correction
Petar Stojanov, Mingming Gong Jaime Carbonell, Kun Zhang
AISTATS, 2019

Data-Driven Approach to Multiple-Source Domain Adaptation
Petar Stojanov, Mingming Gong Jaime Carbonell, Kun Zhang
AISTATS, 2019

Computational Biology
Domain Adaptation with Invariant Representation Learning: What Transformations to Learn?
Dan A Landau*, Scott L Carter*, Petar Stojanov*, Aaron McKenna, Kristen Stevenson, Michael S Lawrence, et al.
Cell

Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity
Austin M Dulak*, Petar Stojanov*, Shouyong Peng, Michael S Lawrence, et al.
Nature Genetics

Mutational heterogeneity in cancer and the search for new cancer-associated genes
Jens G Lohr*, Petar Stojanov*, Scott L Carter, Peter Cruz-Gordillo, Michael S Lawrence, et al.
Cell Press

Widespread genetic heterogeneity in multiple myeloma: implications for targeted therapy
*Michael S Lawrence, Petar Stojanov*, Paz Polak, Gregory V Kryukov, Kristian Cibulskis, et al.
Cancer Cell

Discovery and saturation analysis of cancer genes across 21 tumour types
Michael S Lawrence, Petar Stojanov, Craig H Mermel, James T Robinson, et al.
Nature


Big thank you to Jon Barron for this template source code.